CDS

Accession Number TCMCG015C24719
gbkey CDS
Protein Id XP_027122999.1
Location complement(join(6977755..6977823,6977910..6978014,6979273..6979401,6979945..6979989,6980075..6980149,6980954..6981058,6981135..6981188,6981557..6981957,6982345..6982456,6983440..6983640,6984107..6984235))
Gene LOC113739837
GeneID 113739837
Organism Coffea arabica

Protein

Length 474aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027267198.1
Definition tubulin gamma-1 chain [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category Z
Description Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K10389        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05165        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
GOs GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0000911        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009624        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010103        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032506        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048768        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:1902410        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGAGGGAAATTATCACGCTCCAAGTAGGGCAATGCGGGAATCAGATCGGTATGGAGTTTTGGAAGCAGCTCTGTCTCGAGCATGGCATTAGTAAGGACGGAATTCTTGAAGACTTCGCTACTCAGGGTGGTGACAGGAAAGATGTATTCTTCTATCAAGCTGATGATCAACACTATGTACCACGTGCTTTACTGATGGATTTGGAGCCCAGAGTGATTAATGGTATTCAAAATGGCGAATACAGAAATCTTTACAATCACGAGAATGTATTTATAGCTGATCATGGAGGAGGAGCTGGGAATAATTGGGCAAGTGGATATCATCAGGGTAAGCAATATGAGGAGGATCTGATGGACATGATTGATAGAGAGGCAGATGGAAGCGATAGCCTTGAGGGGTTTGTTTTGTGCCACTCAATTGCTGGAGGAACAGGCTCAGGTATGGGTTCATACCTTTTGGAAACTTTGAATGATCGCTACAGCAAGAAACTTGTCCAGACATACAGTGTATTTCCTAACCAAAATGAGACAAGTGATGTGGTGGTGCAGCCTTACAACTCCCTCTTGACACTTAAGCGTCTCACACTGAATGCCGATTGTGTCGTTGTTCTTGATAATACTGCACTTAATAGAATTGCTGTGGAGCGCCTTCATATTACAACTCCTACTTTTGCACAAACGAACTCTTTAGTTTCCACTGTCATGTCAGCAAGTACTACAACTTTGCGTTATCCAGGATACATGAACAATGACTTGGTTGGACTCCTTGCTTCTTTGATCCCAACTCCAAGATGCCATTTCCTGATGACAGGATACACACCGCTTACTGTTGAACGTCAGGCTAATGTGATTCGTAAGACAACAGTATTGGATGTTATGAGAAGACTTCTTCAGACAAAGAACATTATGGTTTCCTCGTGTGCTCGAACAAAAGAGGCTAGTCAGGCAAAATATATATCTATTCTAAACATTATACAAGGAGAAGTTGATCCTACTCAGGTTCATGAAAGCTTACAGAGAATTCGTGAAAGAAAGCTAGTTAACTTCATTGAATGGGGACCTGCAAGCATCCAGGTTGCTCTCTCAAGGAAGTCTCCTTATGTTCAGACTGCTCATAGGGTCAGTGGTTTAATGTTAGCCAGTCATACTGGCATACGCCACTTATTTGCCAAATGTTTGAGCCAGTATGAGAAGTTGAGGAAGAGGCAAGCCTTTCTTGACAATTATAGGAATCACCCAATGTTTGCTGACAATGATCTTTCAGAATTTGATGAATCTAGAGATATAATCGAGAGTCTTGTTGATGAGTACAAGGCTTGTGAATCACCAGACTACATCAAGTGGGGAATGGAGGATCCGGACCATCTCCTAACAGGGGATGGAAATGCTACTGGAACTGTCGATCCTAAATTAGCAGTATAA
Protein:  
MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWASGYHQGKQYEEDLMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQNETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHITTPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSCARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTGIRHLFAKCLSQYEKLRKRQAFLDNYRNHPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHLLTGDGNATGTVDPKLAV